Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gm7287-201ENSMUST00000205267 602 ntBASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gm45384-201ENSMUST00000210451 277 ntBASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.58□□□□□ -0.72
Trav5-4A0A075B652 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Gm8805-201ENSMUST00000117848 313 ntBASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms