Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.59□□□□□ -0.39
H2afb2S4R1M3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gm44124-201ENSMUST00000204159 472 ntBASIC12.59□□□□□ -0.39
H2afb2S4R1M3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.59□□□□□ -0.39
H2afb2S4R1M3 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb2S4R1M3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
H2afb2S4R1M3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
H2afb2S4R1M3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
H2afb2S4R1M3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
H2afb2S4R1M3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2afb2S4R1M3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2afb2S4R1M3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm24231-201ENSMUST00000104315 133 ntBASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm11591-201ENSMUST00000120063 702 ntBASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm25927-201ENSMUST00000175058 117 ntBASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.58□□□□□ -0.4
H2afb2S4R1M3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Snora73a-201ENSMUST00000082453 205 ntBASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms