Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Ccdc166S4R181 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc166S4R181 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.12□□□□□ -0.47
Ccdc166S4R181 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Gm11964-201ENSMUST00000120982 444 ntBASIC12.12□□□□□ -0.47
Ccdc166S4R181 Gm12176-201ENSMUST00000121420 875 ntBASIC12.12□□□□□ -0.47
Ccdc166S4R181 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Rubie-203ENSMUST00000227803 2430 ntBASIC12.12□□□□□ -0.47
Ccdc166S4R181 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc166S4R181 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.11□□□□□ -0.47
Ccdc166S4R181 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Gm27341-201ENSMUST00000183570 106 ntBASIC12.11□□□□□ -0.47
Ccdc166S4R181 Gm44405-201ENSMUST00000198952 126 ntBASIC12.11□□□□□ -0.47
Ccdc166S4R181 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc166S4R181 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.11□□□□□ -0.47
Ccdc166S4R181 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.11□□□□□ -0.47
Ccdc166S4R181 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.11□□□□□ -0.47
Ccdc166S4R181 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc166S4R181 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc166S4R181 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.1□□□□□ -0.47
Ccdc166S4R181 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc166S4R181 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc166S4R181 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc166S4R181 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc166S4R181 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc166S4R181 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc166S4R181 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms