Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Prpf40aQ9R1C7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Gm14704-201ENSMUST00000120300 874 ntBASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf40aQ9R1C7 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Gm14127-201ENSMUST00000117906 678 ntBASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Gm12363-201ENSMUST00000122250 668 ntBASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Gm44044-201ENSMUST00000205178 1089 ntBASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf40aQ9R1C7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf40aQ9R1C7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms