Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.7□□□□□ -0.06
Scn11aQ9R053 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scn11aQ9R053 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.7□□□□□ -0.06
Scn11aQ9R053 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.7□□□□□ -0.06
Scn11aQ9R053 Gm5705-201ENSMUST00000066241 711 ntBASIC14.7□□□□□ -0.06
Scn11aQ9R053 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn11aQ9R053 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Scn11aQ9R053 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.7□□□□□ -0.06
Scn11aQ9R053 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.7□□□□□ -0.06
Scn11aQ9R053 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.7□□□□□ -0.06
Scn11aQ9R053 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Scn11aQ9R053 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Rprl1-201ENSMUST00000158050 327 ntBASIC14.69□□□□□ -0.06
Scn11aQ9R053 Gm28071-201ENSMUST00000190355 478 ntBASIC14.69□□□□□ -0.06
Scn11aQ9R053 Gm8956-201ENSMUST00000203939 825 ntBASIC14.69□□□□□ -0.06
Scn11aQ9R053 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn11aQ9R053 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.68□□□□□ -0.06
Scn11aQ9R053 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.68□□□□□ -0.06
Scn11aQ9R053 Gm23251-201ENSMUST00000103773 110 ntBASIC14.68□□□□□ -0.06
Scn11aQ9R053 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Gm12579-201ENSMUST00000118040 783 ntBASIC14.68□□□□□ -0.06
Scn11aQ9R053 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Gm9630-201ENSMUST00000178304 885 ntBASIC14.68□□□□□ -0.06
Scn11aQ9R053 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.68□□□□□ -0.06
Scn11aQ9R053 Gm43610-201ENSMUST00000199117 365 ntBASIC14.68□□□□□ -0.06
Scn11aQ9R053 Gm9797-202ENSMUST00000218003 294 ntBASIC14.68□□□□□ -0.06
Scn11aQ9R053 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn11aQ9R053 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.67□□□□□ -0.06
Scn11aQ9R053 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.67□□□□□ -0.06
Scn11aQ9R053 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.67□□□□□ -0.06
Scn11aQ9R053 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.67□□□□□ -0.06
Scn11aQ9R053 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms