Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.11□□□□□ -0.15
AmfrQ9R049 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.11□□□□□ -0.15
AmfrQ9R049 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.11□□□□□ -0.15
AmfrQ9R049 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.11□□□□□ -0.15
AmfrQ9R049 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Gm22018-201ENSMUST00000104357 131 ntBASIC14.11□□□□□ -0.15
AmfrQ9R049 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
AmfrQ9R049 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
AmfrQ9R049 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
AmfrQ9R049 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.11□□□□□ -0.15
AmfrQ9R049 Gm5370-201ENSMUST00000187187 574 ntBASIC14.11□□□□□ -0.15
AmfrQ9R049 Gm4768-201ENSMUST00000206199 686 ntBASIC14.11□□□□□ -0.15
AmfrQ9R049 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.11□□□□□ -0.15
AmfrQ9R049 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
AmfrQ9R049 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
AmfrQ9R049 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Gm10478-201ENSMUST00000084451 396 ntBASIC14.11□□□□□ -0.15
AmfrQ9R049 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AmfrQ9R049 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
AmfrQ9R049 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Matn2-203ENSMUST00000226766 3252 ntBASIC14.1□□□□□ -0.15
AmfrQ9R049 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.1□□□□□ -0.15
AmfrQ9R049 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.1□□□□□ -0.15
AmfrQ9R049 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.1□□□□□ -0.15
AmfrQ9R049 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
AmfrQ9R049 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.1□□□□□ -0.15
AmfrQ9R049 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
AmfrQ9R049 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.1□□□□□ -0.15
AmfrQ9R049 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
AmfrQ9R049 Gm25927-201ENSMUST00000175058 117 ntBASIC14.1□□□□□ -0.15
AmfrQ9R049 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.1□□□□□ -0.15
AmfrQ9R049 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.1□□□□□ -0.15
AmfrQ9R049 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Gm18054-201ENSMUST00000207539 555 ntBASIC14.1□□□□□ -0.15
AmfrQ9R049 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
AmfrQ9R049 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AmfrQ9R049 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.09□□□□□ -0.15
AmfrQ9R049 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
AmfrQ9R049 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
AmfrQ9R049 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.09□□□□□ -0.15
AmfrQ9R049 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 Gm13813-201ENSMUST00000120998 787 ntBASIC14.09□□□□□ -0.15
AmfrQ9R049 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.09□□□□□ -0.15
AmfrQ9R049 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.09□□□□□ -0.15
AmfrQ9R049 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
AmfrQ9R049 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 Gm37042-201ENSMUST00000193816 581 ntBASIC14.09□□□□□ -0.15
AmfrQ9R049 Gm42693-201ENSMUST00000196779 631 ntBASIC14.09□□□□□ -0.15
AmfrQ9R049 Gm19184-201ENSMUST00000196798 928 ntBASIC14.09□□□□□ -0.15
AmfrQ9R049 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
AmfrQ9R049 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.09□□□□□ -0.15
AmfrQ9R049 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.09□□□□□ -0.15
AmfrQ9R049 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AmfrQ9R049 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms