Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf4Q9QZS2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Gm14760-201ENSMUST00000121831 999 ntBASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Gm25144-201ENSMUST00000179561 110 ntBASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Gm25352-201ENSMUST00000179815 110 ntBASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Gm26315-201ENSMUST00000083890 321 ntBASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf4Q9QZS2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Gm5745-201ENSMUST00000183748 313 ntBASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Gm10253-201ENSMUST00000194270 940 ntBASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf4Q9QZS2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf4Q9QZS2 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.71□□□□□ -0.38
Rnf4Q9QZS2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf4Q9QZS2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf4Q9QZS2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf4Q9QZS2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf4Q9QZS2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Rnf4Q9QZS2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.71□□□□□ -0.38
Rnf4Q9QZS2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Rnf4Q9QZS2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf4Q9QZS2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf4Q9QZS2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf4Q9QZS2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf4Q9QZS2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf4Q9QZS2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms