Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim39Q9ESN2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.86□□□□□ -0.51
Trim39Q9ESN2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gm6152-201ENSMUST00000151704 340 ntBASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.86□□□□□ -0.51
Trim39Q9ESN2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim39Q9ESN2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim39Q9ESN2 Gm18473-201ENSMUST00000220543 868 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms