Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Gm14767-201ENSMUST00000121559 586 ntBASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Gm14760-201ENSMUST00000121831 999 ntBASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Gm3436-201ENSMUST00000179930 840 ntBASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Gm27618-201ENSMUST00000183671 60 ntBASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgn3Q9DCB1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 BC043934-202ENSMUST00000185694 2356 ntBASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Gm12291-201ENSMUST00000121627 311 ntBASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Gm27321-201ENSMUST00000185021 205 ntBASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Gm38294-201ENSMUST00000192831 381 ntBASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Gm43703-201ENSMUST00000200523 763 ntBASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgn3Q9DCB1 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms