Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Gm37489-201ENSMUST00000191883 159 ntBASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.74□□□□□ -0.53
Cdc40Q9DC48 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.74□□□□□ -0.53
Cdc40Q9DC48 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Gm15370-201ENSMUST00000117158 253 ntBASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Gm7783-201ENSMUST00000204795 781 ntBASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Cts7-204ENSMUST00000225321 1257 ntBASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc40Q9DC48 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Gm11637-201ENSMUST00000120601 592 ntBASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Gm7809-201ENSMUST00000153199 742 ntBASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Gm24526-201ENSMUST00000082921 158 ntBASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cdc40Q9DC48 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms