Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4bQ9D8B3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4bQ9D8B3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4bQ9D8B3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Chmp4bQ9D8B3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Gm15824-201ENSMUST00000119516 955 ntBASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.89■□□□□ 0.13
Chmp4bQ9D8B3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Rmrp-201ENSMUST00000157463 271 ntBASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Gm37269-201ENSMUST00000193906 1891 ntBASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Chmp4bQ9D8B3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Gm24231-201ENSMUST00000104315 133 ntBASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Gm6266-201ENSMUST00000203844 806 ntBASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Gm5904-201ENSMUST00000210286 865 ntBASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp4bQ9D8B3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms