Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gm13736-201ENSMUST00000119272 253 ntBASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gm29396-201ENSMUST00000185659 716 ntBASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gm10608-202ENSMUST00000213924 676 ntBASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tmem54Q9D7S1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Gm27501-201ENSMUST00000183599 107 ntBASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Gm18935-201ENSMUST00000212692 664 ntBASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Gm7046-201ENSMUST00000221351 977 ntBASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms