Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Gm6447-201ENSMUST00000118905 835 ntBASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Gm15467-201ENSMUST00000120582 445 ntBASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Mir1895-201ENSMUST00000122615 79 ntBASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Gm43703-201ENSMUST00000200523 763 ntBASIC12.74□□□□□ -0.37
Sf3a3Q9D554 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Gm17795-201ENSMUST00000214505 757 ntBASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3a3Q9D554 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms