Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Gm9630-201ENSMUST00000178304 885 ntBASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.67□□□□□ -0.38
Trim42Q9D2H5 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Gm14701-201ENSMUST00000117156 348 ntBASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.66□□□□□ -0.38
Trim42Q9D2H5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.66□□□□□ -0.38
Trim42Q9D2H5 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim42Q9D2H5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Gm6447-201ENSMUST00000118905 835 ntBASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.65□□□□□ -0.38
Trim42Q9D2H5 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms