Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Gm13813-201ENSMUST00000120998 787 ntBASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Gm21854-201ENSMUST00000179901 471 ntBASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Gm2213-201ENSMUST00000197485 688 ntBASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hdhd3Q9CYW4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gm13689-201ENSMUST00000119360 685 ntBASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms