Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.81□□□□□ -0.04
Smc3Q9CW03 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.81□□□□□ -0.04
Smc3Q9CW03 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.81□□□□□ -0.04
Smc3Q9CW03 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smc3Q9CW03 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.8□□□□□ -0.04
Smc3Q9CW03 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.8□□□□□ -0.04
Smc3Q9CW03 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.8□□□□□ -0.04
Smc3Q9CW03 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.8□□□□□ -0.04
Smc3Q9CW03 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.8□□□□□ -0.04
Smc3Q9CW03 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.8□□□□□ -0.04
Smc3Q9CW03 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Daam2-202ENSMUST00000224595 1926 ntBASIC14.8□□□□□ -0.04
Smc3Q9CW03 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc3Q9CW03 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.79□□□□□ -0.04
Smc3Q9CW03 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.79□□□□□ -0.04
Smc3Q9CW03 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.79□□□□□ -0.04
Smc3Q9CW03 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.79□□□□□ -0.04
Smc3Q9CW03 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.79□□□□□ -0.04
Smc3Q9CW03 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Gm10146-201ENSMUST00000072739 309 ntBASIC14.79□□□□□ -0.04
Smc3Q9CW03 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc3Q9CW03 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms