Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Otud1Q9CUB6 Gm28925-201ENSMUST00000188586 168 ntBASIC12□□□□□ -0.49
Otud1Q9CUB6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12□□□□□ -0.49
Otud1Q9CUB6 Gm38319-201ENSMUST00000194537 1266 ntBASIC12□□□□□ -0.49
Otud1Q9CUB6 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC12□□□□□ -0.49
Otud1Q9CUB6 Gm43066-201ENSMUST00000199589 1260 ntBASIC12□□□□□ -0.49
Otud1Q9CUB6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12□□□□□ -0.49
Otud1Q9CUB6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12□□□□□ -0.49
Otud1Q9CUB6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Otud1Q9CUB6 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12□□□□□ -0.49
Otud1Q9CUB6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12□□□□□ -0.49
Otud1Q9CUB6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Otud1Q9CUB6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Otud1Q9CUB6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Otud1Q9CUB6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Otud1Q9CUB6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Gm11531-201ENSMUST00000117614 555 ntBASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Gm14776-201ENSMUST00000121029 887 ntBASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.99□□□□□ -0.49
Otud1Q9CUB6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Gm37259-201ENSMUST00000193903 849 ntBASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Gm44405-201ENSMUST00000198952 126 ntBASIC11.99□□□□□ -0.49
Otud1Q9CUB6 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otud1Q9CUB6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Gm24255-201ENSMUST00000104481 128 ntBASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Gm11964-201ENSMUST00000120982 444 ntBASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.98□□□□□ -0.49
Otud1Q9CUB6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Otud1Q9CUB6 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.98□□□□□ -0.49
Otud1Q9CUB6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms