Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrrc40Q9CRC8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrrc40Q9CRC8 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lrrc40Q9CRC8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrrc40Q9CRC8 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.53□□□□□ -0.4
Lrrc40Q9CRC8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lrrc40Q9CRC8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrrc40Q9CRC8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrrc40Q9CRC8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrrc40Q9CRC8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrrc40Q9CRC8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrrc40Q9CRC8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.52□□□□□ -0.4
Lrrc40Q9CRC8 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrrc40Q9CRC8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.52□□□□□ -0.4
Lrrc40Q9CRC8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Gm29127-201ENSMUST00000188304 517 ntBASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.52□□□□□ -0.41
Lrrc40Q9CRC8 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Gm24231-201ENSMUST00000104315 133 ntBASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Rmrp-201ENSMUST00000157463 271 ntBASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Gm27682-201ENSMUST00000183930 110 ntBASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Gm43818-201ENSMUST00000200605 466 ntBASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrrc40Q9CRC8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrc40Q9CRC8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrc40Q9CRC8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrc40Q9CRC8 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrc40Q9CRC8 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrc40Q9CRC8 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrc40Q9CRC8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrc40Q9CRC8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms