Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Gm45925-201ENSMUST00000218882 744 ntBASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gtf2ird2Q99NI3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Gm2991-201ENSMUST00000173338 480 ntBASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Gm21769-201ENSMUST00000211922 111 ntBASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gtf2ird2Q99NI3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Gm6621-201ENSMUST00000193251 772 ntBASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Gm38341-201ENSMUST00000195357 515 ntBASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Gm7783-201ENSMUST00000204795 781 ntBASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Gm6334-201ENSMUST00000207083 228 ntBASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Gm45865-201ENSMUST00000211815 945 ntBASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.97□□□□□ -0.33
Gtf2ird2Q99NI3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms