Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap3Q99LM2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap3Q99LM2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Gm11803-201ENSMUST00000119966 444 ntBASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Gm2231-201ENSMUST00000125661 612 ntBASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Gm26185-201ENSMUST00000157692 266 ntBASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Gm8810-201ENSMUST00000172895 754 ntBASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap3Q99LM2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Gm14760-201ENSMUST00000121831 999 ntBASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Gm10576-201ENSMUST00000191927 825 ntBASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Gm37497-201ENSMUST00000195830 798 ntBASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap3Q99LM2 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Snord83b-201ENSMUST00000104546 94 ntBASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Gm13369-201ENSMUST00000119442 987 ntBASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms