Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Gm20482-202ENSMUST00000174729 825 ntBASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Gm27320-201ENSMUST00000184892 109 ntBASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lysmd3Q99LE3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Gm14726-201ENSMUST00000120623 896 ntBASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Gm37201-201ENSMUST00000191845 523 ntBASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd3Q99LE3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lysmd3Q99LE3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.31
Lysmd3Q99LE3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lysmd3Q99LE3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Gm26083-201ENSMUST00000157904 193 ntBASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Gm25043-201ENSMUST00000158604 212 ntBASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Gm17376-201ENSMUST00000166016 84 ntBASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Gm31256-201ENSMUST00000194705 506 ntBASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd3Q99LE3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms