Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha8Q91Y12 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Gm16177-201ENSMUST00000120728 718 ntBASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha8Q91Y12 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Snord83b-201ENSMUST00000104546 94 ntBASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Gm12363-201ENSMUST00000122250 668 ntBASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Gm10268-201ENSMUST00000085340 555 ntBASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.28□□□□□ -0.44
Pcdha8Q91Y12 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdha8Q91Y12 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdha8Q91Y12 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdha8Q91Y12 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdha8Q91Y12 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.27□□□□□ -0.44
Pcdha8Q91Y12 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdha8Q91Y12 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms