Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb8Q91XZ2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Pcdhb8Q91XZ2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb8Q91XZ2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb8Q91XZ2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb8Q91XZ2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb8Q91XZ2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Gm26035-201ENSMUST00000083065 308 ntBASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb8Q91XZ2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Gm11424-201ENSMUST00000121929 829 ntBASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb8Q91XZ2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms