Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Gm4271-201ENSMUST00000174444 973 ntBASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Gm19163-201ENSMUST00000223313 780 ntBASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H1fooQ8VIK3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Gm29649-201ENSMUST00000185649 419 ntBASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Gm4768-201ENSMUST00000206199 686 ntBASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Gm6091-201ENSMUST00000098307 165 ntBASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.56□□□□□ -0.72
H1fooQ8VIK3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Cog3-203ENSMUST00000227473 4197 ntBASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
H1fooQ8VIK3 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms