Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkd2Q8VE28 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkd2Q8VE28 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkd2Q8VE28 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkd2Q8VE28 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkd2Q8VE28 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkd2Q8VE28 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkd2Q8VE28 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkd2Q8VE28 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Gm26083-201ENSMUST00000157904 193 ntBASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Gm7029-201ENSMUST00000173226 450 ntBASIC11.52□□□□□ -0.57
Nkd2Q8VE28 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Gm19931-201ENSMUST00000198920 368 ntBASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Cts7-204ENSMUST00000225321 1257 ntBASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Nkd2Q8VE28 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.51□□□□□ -0.57
Nkd2Q8VE28 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Gm14350-201ENSMUST00000116642 640 ntBASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Gm16202-201ENSMUST00000117532 544 ntBASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Gm25261-201ENSMUST00000157416 134 ntBASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Gm16570-201ENSMUST00000161951 436 ntBASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Gm38241-201ENSMUST00000192641 898 ntBASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkd2Q8VE28 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms