Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Cog3-203ENSMUST00000227473 4197 ntBASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Gm44124-201ENSMUST00000204159 472 ntBASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Gm29705-201ENSMUST00000212598 474 ntBASIC12.63□□□□□ -0.39
Vps39Q8R5L3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Gm19163-201ENSMUST00000223313 780 ntBASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps39Q8R5L3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gm12138-201ENSMUST00000122180 951 ntBASIC12.62□□□□□ -0.39
Vps39Q8R5L3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gm24644-201ENSMUST00000157114 139 ntBASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gm4271-201ENSMUST00000174444 973 ntBASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gm27847-201ENSMUST00000183711 107 ntBASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gm27375-201ENSMUST00000183799 107 ntBASIC12.62□□□□□ -0.39
Vps39Q8R5L3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms