Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Gm7730-201ENSMUST00000212486 454 ntBASIC10.26□□□□□ -0.77
Nup35Q8R4R6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup35Q8R4R6 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Gm23935-201ENSMUST00000102303 57 ntBASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Gm24270-201ENSMUST00000102326 57 ntBASIC10.25□□□□□ -0.77
Nup35Q8R4R6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Gm22189-201ENSMUST00000103822 86 ntBASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Gm24245-201ENSMUST00000157318 57 ntBASIC10.25□□□□□ -0.77
Nup35Q8R4R6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms