Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Gm3551-201ENSMUST00000190750 664 ntBASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Gm5705-201ENSMUST00000066241 711 ntBASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Gm22711-201ENSMUST00000116890 133 ntBASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Gm24398-201ENSMUST00000157870 109 ntBASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 AC121960.1-201ENSMUST00000227982 564 ntBASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 AC122350.1-201ENSMUST00000228135 533 ntBASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col23a1Q8K4G2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Mir671-201ENSMUST00000102432 98 ntBASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Gm12783-201ENSMUST00000121425 397 ntBASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 CT009536.2-201ENSMUST00000225370 665 ntBASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Gm15784-201ENSMUST00000120260 1462 ntBASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col23a1Q8K4G2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Gm13910-201ENSMUST00000121752 1428 ntBASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms