Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Gm12363-201ENSMUST00000122250 668 ntBASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cchcr1Q8K2I2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Gm12490-201ENSMUST00000120255 560 ntBASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cchcr1Q8K2I2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cchcr1Q8K2I2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms