Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Gm12742-201ENSMUST00000117326 410 ntBASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Mir339-201ENSMUST00000083659 96 ntBASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfwd3Q8CIK8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Gm6222-202ENSMUST00000182143 629 ntBASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Gm18584-201ENSMUST00000203098 964 ntBASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfwd3Q8CIK8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms