Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Gm4735-201ENSMUST00000138679 1302 ntBASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Gm5855-201ENSMUST00000200240 1305 ntBASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Rn7s1-201ENSMUST00000174924 300 ntBASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Rn7s2-201ENSMUST00000175032 300 ntBASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Gm26461-201ENSMUST00000175064 290 ntBASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Gm45598-202ENSMUST00000210719 986 ntBASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab11fip3Q8CHD8 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Gm16505-201ENSMUST00000179981 232 ntBASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab11fip3Q8CHD8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms