Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Gm12291-201ENSMUST00000121627 311 ntBASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Gm26308-201ENSMUST00000157768 69 ntBASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Gm27306-201ENSMUST00000183970 107 ntBASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28bQ8CEG5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28bQ8CEG5 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.42
Ccdc28bQ8CEG5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28bQ8CEG5 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28bQ8CEG5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28bQ8CEG5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28bQ8CEG5 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28bQ8CEG5 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.46□□□□□ -0.42
Ccdc28bQ8CEG5 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28bQ8CEG5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28bQ8CEG5 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28bQ8CEG5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ccdc28bQ8CEG5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms