Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Mir7654-201ENSMUST00000185082 70 ntBASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Gm28631-201ENSMUST00000190740 334 ntBASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Gm6218-201ENSMUST00000219812 628 ntBASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam228aQ8CDW1 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Fam228aQ8CDW1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Fam228aQ8CDW1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Fam228aQ8CDW1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Fam228aQ8CDW1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam228aQ8CDW1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam228aQ8CDW1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam228aQ8CDW1 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.21□□□□□ -0.3
Fam228aQ8CDW1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Fam228aQ8CDW1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.21□□□□□ -0.3
Fam228aQ8CDW1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Fam228aQ8CDW1 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Gm16215-201ENSMUST00000161990 637 ntBASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam228aQ8CDW1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fam228aQ8CDW1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.19□□□□□ -0.3
Fam228aQ8CDW1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Fam228aQ8CDW1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Fam228aQ8CDW1 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Fam228aQ8CDW1 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fam228aQ8CDW1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fam228aQ8CDW1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Fam228aQ8CDW1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.19□□□□□ -0.3
Fam228aQ8CDW1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fam228aQ8CDW1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.19□□□□□ -0.3
Fam228aQ8CDW1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Fam228aQ8CDW1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms