Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm14350-201ENSMUST00000116642 640 ntBASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm16202-201ENSMUST00000117532 544 ntBASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm27390-201ENSMUST00000184516 176 ntBASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Gm18473-201ENSMUST00000220543 868 ntBASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc87Q8CDL9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Gm11814-201ENSMUST00000119515 929 ntBASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Gm6152-201ENSMUST00000151704 340 ntBASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Gm44069-201ENSMUST00000204898 506 ntBASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Itm2b-204ENSMUST00000228637 783 ntBASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc87Q8CDL9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms