Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Gm12203-201ENSMUST00000118235 598 ntBASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Gm12209-201ENSMUST00000120089 596 ntBASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Snora78-201ENSMUST00000158630 128 ntBASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Gm27486-201ENSMUST00000184923 80 ntBASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcpip1Q8CDG3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Gm16479-201ENSMUST00000121706 932 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Gm22121-201ENSMUST00000175148 54 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Gm8652-201ENSMUST00000181363 964 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Gm45784-201ENSMUST00000188360 142 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Gm8099-201ENSMUST00000200510 742 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Olfr582-201ENSMUST00000098212 960 ntBASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcpip1Q8CDG3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms