Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.68□□□□□ -0.06
Alx1Q8C8B0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Gm12015-201ENSMUST00000117065 843 ntBASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.67□□□□□ -0.06
Alx1Q8C8B0 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Alx1Q8C8B0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.66□□□□□ -0.06
Alx1Q8C8B0 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Alx1Q8C8B0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Gm14644-201ENSMUST00000116671 647 ntBASIC14.65□□□□□ -0.06
Alx1Q8C8B0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms