Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Gm7046-201ENSMUST00000221351 977 ntBASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Gm15370-201ENSMUST00000117158 253 ntBASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Gm18935-201ENSMUST00000212692 664 ntBASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Gm8227-201ENSMUST00000223306 571 ntBASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc60Q8C4J0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Gm10434-201ENSMUST00000101158 471 ntBASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Mir8109-201ENSMUST00000184375 117 ntBASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Gm37737-201ENSMUST00000195013 1638 ntBASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc60Q8C4J0 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm27196-201ENSMUST00000184787 2582 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms