Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Ska3Q8C263 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.88□□□□□ -0.51
Ska3Q8C263 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.88□□□□□ -0.51
Ska3Q8C263 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.88□□□□□ -0.51
Ska3Q8C263 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.88□□□□□ -0.51
Ska3Q8C263 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.88□□□□□ -0.51
Ska3Q8C263 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.88□□□□□ -0.51
Ska3Q8C263 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Gm24548-201ENSMUST00000158650 108 ntBASIC11.88□□□□□ -0.51
Ska3Q8C263 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.88□□□□□ -0.51
Ska3Q8C263 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.88□□□□□ -0.51
Ska3Q8C263 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.88□□□□□ -0.51
Ska3Q8C263 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.88□□□□□ -0.51
Ska3Q8C263 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ska3Q8C263 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ska3Q8C263 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.88□□□□□ -0.51
Ska3Q8C263 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.88□□□□□ -0.51
Ska3Q8C263 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Ska3Q8C263 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Ska3Q8C263 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Ska3Q8C263 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.88□□□□□ -0.51
Ska3Q8C263 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska3Q8C263 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Ska3Q8C263 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Gm22018-201ENSMUST00000104357 131 ntBASIC11.87□□□□□ -0.51
Ska3Q8C263 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.87□□□□□ -0.51
Ska3Q8C263 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.87□□□□□ -0.51
Ska3Q8C263 Gm16296-201ENSMUST00000159905 325 ntBASIC11.87□□□□□ -0.51
Ska3Q8C263 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.87□□□□□ -0.51
Ska3Q8C263 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Gm17420-201ENSMUST00000164753 153 ntBASIC11.87□□□□□ -0.51
Ska3Q8C263 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ska3Q8C263 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.87□□□□□ -0.51
Ska3Q8C263 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ska3Q8C263 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.87□□□□□ -0.51
Ska3Q8C263 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.87□□□□□ -0.51
Ska3Q8C263 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.87□□□□□ -0.51
Ska3Q8C263 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.87□□□□□ -0.51
Ska3Q8C263 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.87□□□□□ -0.51
Ska3Q8C263 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.87□□□□□ -0.51
Ska3Q8C263 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska3Q8C263 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms