Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sh3rf3Q8C120 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sh3rf3Q8C120 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sh3rf3Q8C120 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sh3rf3Q8C120 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sh3rf3Q8C120 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Gm14921-201ENSMUST00000118643 908 ntBASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Gm12384-201ENSMUST00000119228 919 ntBASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Gm25261-201ENSMUST00000157416 134 ntBASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Gm45784-201ENSMUST00000188360 142 ntBASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.14□□□□□ -0.31
Sh3rf3Q8C120 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Gm23931-201ENSMUST00000103842 109 ntBASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Gm25927-201ENSMUST00000175058 117 ntBASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf3Q8C120 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Gm7809-201ENSMUST00000153199 742 ntBASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Mir1982-201ENSMUST00000157368 74 ntBASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms