Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13□□□□□ -0.33
Trub1Q8C0D0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13□□□□□ -0.33
Trub1Q8C0D0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Trub1Q8C0D0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Gm16379-201ENSMUST00000161469 348 ntBASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Gm8018-201ENSMUST00000173536 789 ntBASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Gm8762-201ENSMUST00000193486 339 ntBASIC12.99□□□□□ -0.33
Trub1Q8C0D0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trub1Q8C0D0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Gm11597-201ENSMUST00000121423 964 ntBASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Mir1982-201ENSMUST00000157368 74 ntBASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Gm19184-201ENSMUST00000196798 928 ntBASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trub1Q8C0D0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms