Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC14.01□□□□□ -0.17
Trim35Q8C006 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.01□□□□□ -0.17
Trim35Q8C006 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Gm10307-201ENSMUST00000189839 1337 ntBASIC14.01□□□□□ -0.17
Trim35Q8C006 AC159624.1-201ENSMUST00000217762 1344 ntBASIC14.01□□□□□ -0.17
Trim35Q8C006 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Gm14677-201ENSMUST00000117866 486 ntBASIC14.01□□□□□ -0.17
Trim35Q8C006 Gm14200-201ENSMUST00000122256 192 ntBASIC14.01□□□□□ -0.17
Trim35Q8C006 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC14.01□□□□□ -0.17
Trim35Q8C006 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Gm27533-201ENSMUST00000183800 152 ntBASIC14.01□□□□□ -0.17
Trim35Q8C006 Gm27680-201ENSMUST00000184192 160 ntBASIC14.01□□□□□ -0.17
Trim35Q8C006 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim35Q8C006 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC14.01□□□□□ -0.17
Trim35Q8C006 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 AC124542.1-201ENSMUST00000205588 908 ntBASIC14.01□□□□□ -0.17
Trim35Q8C006 Gm32567-201ENSMUST00000211244 682 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim35Q8C006 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim35Q8C006 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim35Q8C006 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Gm18508-201ENSMUST00000215790 1642 ntBASIC14.01□□□□□ -0.17
Trim35Q8C006 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trim35Q8C006 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC14□□□□□ -0.17
Trim35Q8C006 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trim35Q8C006 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim35Q8C006 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Retreg1-206ENSMUST00000228306 1430 ntBASIC14□□□□□ -0.17
Trim35Q8C006 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim35Q8C006 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
Trim35Q8C006 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14□□□□□ -0.17
Trim35Q8C006 Dtwd1-202ENSMUST00000170908 1342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14□□□□□ -0.17
Trim35Q8C006 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim35Q8C006 Gm14624-201ENSMUST00000117746 192 ntBASIC14□□□□□ -0.17
Trim35Q8C006 Gm12375-201ENSMUST00000119331 921 ntBASIC14□□□□□ -0.17
Trim35Q8C006 Gm14057-201ENSMUST00000120631 482 ntBASIC14□□□□□ -0.17
Trim35Q8C006 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14□□□□□ -0.17
Trim35Q8C006 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC14□□□□□ -0.17
Trim35Q8C006 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC14□□□□□ -0.17
Trim35Q8C006 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14□□□□□ -0.17
Trim35Q8C006 Gm28384-201ENSMUST00000189079 463 ntBASIC14□□□□□ -0.17
Trim35Q8C006 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC14□□□□□ -0.17
Trim35Q8C006 Trbv28-201ENSMUST00000192804 264 ntBASIC14□□□□□ -0.17
Trim35Q8C006 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC14□□□□□ -0.17
Trim35Q8C006 Gm18747-201ENSMUST00000198129 648 ntBASIC14□□□□□ -0.17
Trim35Q8C006 Gm6888-201ENSMUST00000221983 706 ntBASIC14□□□□□ -0.17
Trim35Q8C006 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14□□□□□ -0.17
Trim35Q8C006 Rnf219-204ENSMUST00000228448 1056 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Trim35Q8C006 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Cldn10-201ENSMUST00000047761 1148 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim35Q8C006 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim35Q8C006 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim35Q8C006 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms