Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.76□□□□□ -0.37
Usp43Q8BUM9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Gm22018-201ENSMUST00000104357 131 ntBASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Gm11597-201ENSMUST00000121423 964 ntBASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Gm5370-201ENSMUST00000187187 574 ntBASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Gm37008-201ENSMUST00000195712 319 ntBASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Gm25857-201ENSMUST00000082788 129 ntBASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Gm13315-201ENSMUST00000120376 991 ntBASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Gm44405-201ENSMUST00000198952 126 ntBASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Gm45925-201ENSMUST00000218882 744 ntBASIC12.75□□□□□ -0.37
Usp43Q8BUM9 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp43Q8BUM9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm5187-201ENSMUST00000117317 991 ntBASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm9022-201ENSMUST00000182482 992 ntBASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm18062-201ENSMUST00000208020 547 ntBASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm18055-201ENSMUST00000208254 547 ntBASIC12.74□□□□□ -0.37
Usp43Q8BUM9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms