Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Gm27731-201ENSMUST00000185192 107 ntBASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh20Q8BIZ0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Gm12384-201ENSMUST00000119228 919 ntBASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Gm44069-201ENSMUST00000204898 506 ntBASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh20Q8BIZ0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Gm6447-201ENSMUST00000118905 835 ntBASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Gm40466-201ENSMUST00000212174 422 ntBASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Pcdh20Q8BIZ0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms