Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4dQ8BGV9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Gm25214-201ENSMUST00000104573 129 ntBASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Gm13570-201ENSMUST00000140763 309 ntBASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atg4dQ8BGV9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Gm2991-201ENSMUST00000173338 480 ntBASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Gm38266-201ENSMUST00000194931 421 ntBASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Gm6334-201ENSMUST00000207083 228 ntBASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Gm21769-201ENSMUST00000211922 111 ntBASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Cts7-204ENSMUST00000225321 1257 ntBASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4dQ8BGV9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms