Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smndc1Q8BGT7 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smndc1Q8BGT7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smndc1Q8BGT7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smndc1Q8BGT7 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smndc1Q8BGT7 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.3□□□□□ -0.44
Smndc1Q8BGT7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Mir6392-201ENSMUST00000184924 108 ntBASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smndc1Q8BGT7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Gm9908-201ENSMUST00000211534 448 ntBASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Gm18624-201ENSMUST00000220966 658 ntBASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smndc1Q8BGT7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms