Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Paupar-201ENSMUST00000194826 3482 ntBASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.79□□□□□ -0.04
Samm50Q8BGH2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Gm1335-201ENSMUST00000121653 386 ntBASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Gm13123-201ENSMUST00000122173 492 ntBASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Gm6458-201ENSMUST00000211573 635 ntBASIC14.78□□□□□ -0.04
Samm50Q8BGH2 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Samm50Q8BGH2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Samm50Q8BGH2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms