Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ubp1Q811S7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.49□□□□□ -0.41
Ubp1Q811S7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.48□□□□□ -0.41
Ubp1Q811S7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Gm13392-201ENSMUST00000117708 150 ntBASIC12.48□□□□□ -0.41
Ubp1Q811S7 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.48□□□□□ -0.41
Ubp1Q811S7 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.48□□□□□ -0.41
Ubp1Q811S7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.48□□□□□ -0.41
Ubp1Q811S7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.48□□□□□ -0.41
Ubp1Q811S7 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.48□□□□□ -0.41
Ubp1Q811S7 Gm3890-201ENSMUST00000182416 207 ntBASIC12.48□□□□□ -0.41
Ubp1Q811S7 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.48□□□□□ -0.41
Ubp1Q811S7 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.48□□□□□ -0.41
Ubp1Q811S7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.48□□□□□ -0.41
Ubp1Q811S7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Gm9823-201ENSMUST00000051212 327 ntBASIC12.48□□□□□ -0.41
Ubp1Q811S7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.48□□□□□ -0.41
Ubp1Q811S7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.48□□□□□ -0.41
Ubp1Q811S7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubp1Q811S7 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Gm14921-201ENSMUST00000118643 908 ntBASIC12.47□□□□□ -0.41
Ubp1Q811S7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.47□□□□□ -0.41
Ubp1Q811S7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubp1Q811S7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ubp1Q811S7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms