Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm29001-201ENSMUST00000186177 697 ntBASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Gm28292-201ENSMUST00000186593 697 ntBASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Gm28101-201ENSMUST00000187608 697 ntBASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Gm29076-201ENSMUST00000187689 697 ntBASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Gm28302-201ENSMUST00000187931 697 ntBASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Gm28646-201ENSMUST00000188220 697 ntBASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Gm28205-201ENSMUST00000189177 697 ntBASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Gm29032-201ENSMUST00000189797 697 ntBASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Gm28695-201ENSMUST00000190300 697 ntBASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Gm37448-201ENSMUST00000192795 697 ntBASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp6nlQ80XC3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Gm23949-201ENSMUST00000104027 127 ntBASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 AY036118-201ENSMUST00000200021 923 ntBASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp6nlQ80XC3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm12616-201ENSMUST00000118594 382 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm5616-201ENSMUST00000165252 384 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm8741-201ENSMUST00000174736 384 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm12624-201ENSMUST00000177615 382 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm12621-201ENSMUST00000177760 382 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm12615-201ENSMUST00000177970 382 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm12622-201ENSMUST00000177975 382 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm12627-201ENSMUST00000178412 382 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm12625-201ENSMUST00000179122 382 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm12614-201ENSMUST00000179586 382 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm12613-201ENSMUST00000180323 382 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm9211-201ENSMUST00000182882 975 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Spcs1-203ENSMUST00000226374 592 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms