Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh8Q7TSK3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.46□□□□□ -0.42
Pcdh8Q7TSK3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Daam2-202ENSMUST00000224595 1926 ntBASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm12291-201ENSMUST00000121627 311 ntBASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms