Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Mir686-201ENSMUST00000102174 109 ntBASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Gm11978-201ENSMUST00000122315 466 ntBASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Gm44124-201ENSMUST00000204159 472 ntBASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Gm17794-201ENSMUST00000220252 955 ntBASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctdp1Q7TSG2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Gm15429-201ENSMUST00000151268 798 ntBASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.74□□□□□ -0.21
Ctdp1Q7TSG2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctdp1Q7TSG2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms